Janakiram's answer was perfect. Running Utilities requires you to re-convert, but it is very quick. Less than 1 minute per company. I assume it is updating the module in question:
Janakiram's answer:
1. Make backups of all DB
2. Run the scripts below
Delete DYNAMICS..DU000030 where PRODID = 6499
Delete DYNAMICS..DU000020 where PRODID = 6499
Update DYNAMICS..DB_Upgrade set db_verOldMajor = 0, db_verOldBuild = 0, db_status = 0 where PRODID = 6499
3. Launch GP Utilities directly. Do not reinitialize by logging into Dynamics GP before launching Utilities.